STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASCL4Achaete-scute family bHLH transcription factor 4. (181 aa)    
Predicted Functional Partners:
TCF4
Transcription factor 4.
    
 0.609
ENSMMDP00005003619
Transcription factor 3a.
    
 0.609
ENSMMDP00005003629
annotation not available
    
 0.609
LOC115358514
Transcription factor E2-alpha-like.
    
 0.609
ENSMMDP00005027552
Transcription factor 12.
    
 0.609
ENSMMDP00005009767
annotation not available
    
 0.595
bhlhe23
Basic helix-loop-helix family member e23.
   
 
 0.576
ENSMMDP00005008838
LIM-domain binding 1b.
    
 0.561
LOC115372411
LIM domain-binding protein 1-A-like.
    
 0.561
LOC115366895
LIM domain-binding protein 2.
    
 0.561
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.