STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMMDP00005045407POU class 3 homeobox 2b. (379 aa)    
Predicted Functional Partners:
ENSMMDP00005012048
annotation not available
    
  0.651
gtf2b
General transcription factor IIB.
    
  0.600
LOC115371254
Transcription initiation factor TFIID subunit 9-like.
     
 0.584
gtf2e1
General transcription factor IIE subunit 1.
    
  0.578
ENSMMDP00005034365
Brain-specific homeobox.
   
 0.561
snapc3
Small nuclear RNA activating complex polypeptide 3.
   
 
  0.547
sall4
Spalt like transcription factor 4.
    
 0.520
ENSMMDP00005034057
Spalt-like transcription factor 3b.
    
 0.520
LOC115360432
Sal-like protein 1.
    
 0.520
sall1
Spalt like transcription factor 1.
    
 0.520
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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