STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TA03020DEAD-box family helicase, putative. (945 aa)    
Predicted Functional Partners:
TA04540
Spliceosome-associated protein, putative.
   
 0.997
TA17065
Myb-like DNA binding protein (CDC5 homologue), putative.
   
 0.997
TA03780
Splicing factor (PRP8 homologue), putative.
   
 
 0.996
TA20005
Rna-processing protein, putative.
   
 0.996
TA04320
DEAD-box family helicase, putative.
  
0.993
TA07140
Splicing factor 3b subunit, putative.
   
 0.992
TA03380
Splicing factor subunit, putative.
   
 0.992
TA13035
Pre-mRNA splicing factor (PRP17 homologue), putative.
   
 0.992
TA11730
PHF5-like zinc-finger protein, putative.
   
 0.989
TA14055
Cyclophilin, putative.
   
 0.989
Your Current Organism:
Theileria annulata
NCBI taxonomy Id: 5874
Other names: T. annulata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.