STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TA19400Uncharacterized protein. (502 aa)    
Predicted Functional Partners:
TA02605
RED_N domain-containing protein.
   
 0.999
TA08030
Microfibrillar-associated protein, putative.
   
 0.971
TA08155
U1-type domain-containing protein.
    
 0.923
TA03635
PRP38 family, putative.
   
 0.904
TA05710
Pre-mRNA splicing factor (U5 snRNP-associated), putative.
    
 0.877
TA10155
Matrin-type domain-containing protein.
    
 0.854
TA18695
Ubiquitin-like protein, putative.
    
 0.843
TA03780
Splicing factor (PRP8 homologue), putative.
    
 
 0.829
TA03015
U5 snRNP-specific component (DIM1 homologue), putative.
    
  0.811
LSM8
U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.
   
   0.805
Your Current Organism:
Theileria annulata
NCBI taxonomy Id: 5874
Other names: T. annulata
Server load: low (40%) [HD]