Q4N9B2_THEPA protein (Theileria parva) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

Q4N9B2_THEPA

Uncharacterized protein. (526 aa)

Predicted Functional Partners:

Q4N0S2_THEPA

0.999

Q4N2I9_THEPA

0.974

Q4N2G4_THEPA

0.931

Q4N7M3_THEPA

0.915

Q4N084_THEPA

0.914

Q4MZ69_THEPA

0.864

Q4N062_THEPA

0.858

Q4N828_THEPA

0.831

LSM8

0.824

Q4N1I5_THEPA

0.824

Your Current Organism:

Theileria parva

NCBI taxonomy Id: 5875
Other names: T. parva

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LSM8	Q4MZ69_THEPA	Q4MZU2	Q4MZ69	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Ubiquitin, putative.	0.804
LSM8	Q4N062_THEPA	Q4MZU2	Q4N062	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Splicing factor Prp8, putative.	0.999
LSM8	Q4N084_THEPA	Q4MZU2	Q4N084	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Uncharacterized protein.	0.704
LSM8	Q4N0S2_THEPA	Q4MZU2	Q4N0S2	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	RED_N domain-containing protein.	0.554
LSM8	Q4N1I5_THEPA	Q4MZU2	Q4N1I5	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Uncharacterized protein.	0.629
LSM8	Q4N2G4_THEPA	Q4MZU2	Q4N2G4	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	U1-type domain-containing protein.	0.976
LSM8	Q4N2I9_THEPA	Q4MZU2	Q4N2I9	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	MFAP1 domain-containing protein.	0.687
LSM8	Q4N7M3_THEPA	Q4MZU2	Q4N7M3	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	TPR_REGION domain-containing protein.	0.999
LSM8	Q4N828_THEPA	Q4MZU2	Q4N828	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Mitosis protein dim1, putative.	0.981
LSM8	Q4N9B2_THEPA	Q4MZU2	Q4N9B2	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Uncharacterized protein.	0.824
Q4MZ69_THEPA	LSM8	Q4MZ69	Q4MZU2	Ubiquitin, putative.	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.804
Q4MZ69_THEPA	Q4N062_THEPA	Q4MZ69	Q4N062	Ubiquitin, putative.	Splicing factor Prp8, putative.	0.999
Q4MZ69_THEPA	Q4N084_THEPA	Q4MZ69	Q4N084	Ubiquitin, putative.	Uncharacterized protein.	0.958
Q4MZ69_THEPA	Q4N1I5_THEPA	Q4MZ69	Q4N1I5	Ubiquitin, putative.	Uncharacterized protein.	0.804
Q4MZ69_THEPA	Q4N2G4_THEPA	Q4MZ69	Q4N2G4	Ubiquitin, putative.	U1-type domain-containing protein.	0.912
Q4MZ69_THEPA	Q4N2I9_THEPA	Q4MZ69	Q4N2I9	Ubiquitin, putative.	MFAP1 domain-containing protein.	0.969
Q4MZ69_THEPA	Q4N7M3_THEPA	Q4MZ69	Q4N7M3	Ubiquitin, putative.	TPR_REGION domain-containing protein.	0.859
Q4MZ69_THEPA	Q4N828_THEPA	Q4MZ69	Q4N828	Ubiquitin, putative.	Mitosis protein dim1, putative.	0.897
Q4MZ69_THEPA	Q4N9B2_THEPA	Q4MZ69	Q4N9B2	Ubiquitin, putative.	Uncharacterized protein.	0.864
Q4N062_THEPA	LSM8	Q4N062	Q4MZU2	Splicing factor Prp8, putative.	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999