STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0C8H6_PARTEUncharacterized protein. (713 aa)    
Predicted Functional Partners:
A0BNP0_PARTE
RRM domain-containing protein.
    
 0.946
A0C1J5_PARTE
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.926
A0DU83_PARTE
Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.
   
 0.924
A0D257_PARTE
Sm domain-containing protein.
   
 0.921
A0DPN6_PARTE
Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme.
    
 
 0.887
A0DM55_PARTE
Nuclear cap-binding protein subunit 2.
    
 0.861
A0DNI2_PARTE
Nuclear cap-binding protein subunit 2.
    
 0.861
A0C585_PARTE
MIF4G_like_2 domain-containing protein.
    
 0.859
A0CRM1_PARTE
MIF4G_like_2 domain-containing protein.
    
 0.859
A0CQ28_PARTE
Eukaryotic translation initiation factor 3 subunit A.
   
 0.856
Your Current Organism:
Paramecium tetraurelia
NCBI taxonomy Id: 5888
Other names: P. tetraurelia, Paramecium aurelia syngen 4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.