STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0CFK5_PARTEHomeobox domain-containing protein. (239 aa)    
Predicted Functional Partners:
A0EEZ3_PARTE
MADS-box domain-containing protein.
   
 
 0.660
A0BCV3_PARTE
Hist_deacetyl domain-containing protein.
    
 0.500
A0BS74_PARTE
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.500
A0C993_PARTE
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.500
A0CXG2_PARTE
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.500
A0CYU7_PARTE
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.500
A0DGA6_PARTE
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.500
A0DPM0_PARTE
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.500
A0E3Q5_PARTE
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.500
A0EBP6_PARTE
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.500
Your Current Organism:
Paramecium tetraurelia
NCBI taxonomy Id: 5888
Other names: P. tetraurelia, Paramecium aurelia syngen 4
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