STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0CRH5_PARTEUroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family. (398 aa)    
Predicted Functional Partners:
A0DSA9_PARTE
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
 
 
 0.995
A0CDD9_PARTE
Uncharacterized protein.
  
 0.985
A0DFM3_PARTE
Uncharacterized protein.
  
 0.985
PTMB.433c
Ferrochelatase, putative; Belongs to the ferrochelatase family.
 
  
 0.969
A0D1G0_PARTE
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
 
 
 0.961
A0BE67_PARTE
Uncharacterized protein.
  
 0.911
A0DD68_PARTE
Uncharacterized protein.
  
 0.911
A0C9P3_PARTE
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
  
  
 
0.901
A0C528_PARTE
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
  
  
 
0.900
A0D7J9_PARTE
Uncharacterized protein.
  
 
 0.833
Your Current Organism:
Paramecium tetraurelia
NCBI taxonomy Id: 5888
Other names: P. tetraurelia, Paramecium aurelia syngen 4
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.