STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0DAZ3_PARTEWD_REPEATS_REGION domain-containing protein. (554 aa)    
Predicted Functional Partners:
A0CQD2_PARTE
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
 0.715
A0C0R0_PARTE
JmjC domain-containing protein.
    
 0.710
A0D6Z2_PARTE
JmjC domain-containing protein.
    
 0.710
A0BJL0_PARTE
TROVE domain-containing protein.
    
 0.671
A0D6T5_PARTE
TROVE domain-containing protein.
    
 0.671
A0D986_PARTE
TROVE domain-containing protein.
    
 0.671
A0BZ12_PARTE
Uncharacterized protein.
    
 0.664
A0BUT4_PARTE
Ubiquitin-like domain-containing protein.
    
 0.630
A0C9Z8_PARTE
Ubiquitin-like domain-containing protein.
    
 0.630
A0DFX5_PARTE
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
    
  0.609
Your Current Organism:
Paramecium tetraurelia
NCBI taxonomy Id: 5888
Other names: P. tetraurelia, Paramecium aurelia syngen 4
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