STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0DC19_PARTEMI domain-containing protein. (828 aa)    
Predicted Functional Partners:
A0D7Q3_PARTE
Uncharacterized protein.
   
 
 0.998
A0DDV4_PARTE
Sas10 domain-containing protein.
   
 
 0.998
A0DHM1_PARTE
NUC153 domain-containing protein.
   
   0.998
A0DK92_PARTE
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 
 0.998
A0E352_PARTE
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 
 0.998
A0EI22_PARTE
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
   
 
 0.998
A0CDW8_PARTE
Uncharacterized protein.
   
 
 0.997
A0DU40_PARTE
Uncharacterized protein.
   
   0.997
A0BCU1_PARTE
Uncharacterized protein.
   
   0.996
A0BEU9_PARTE
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 
 0.996
Your Current Organism:
Paramecium tetraurelia
NCBI taxonomy Id: 5888
Other names: P. tetraurelia, Paramecium aurelia syngen 4
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