STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A316Z910Scavenger mRNA decapping enzyme. (300 aa)    
Predicted Functional Partners:
A0A316ZDC3
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
 
 
    0.764
A0A316ZJH8
Putative 5-3 exonuclease.
    
 
 0.635
A0A316Z5N8
Uncharacterized protein.
 
      0.454
A0A316ZA27
Trehalase.
   
 
 0.449
A0A316ZCI2
Protein transport protein SEC22; Belongs to the synaptobrevin family.
 
      0.445
TAH18
NADPH-dependent diflavin oxidoreductase 1; Component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery. Required for the maturation of extramitochondrial Fe-S proteins. Part of an electron transfer chain functioning in an early step of cytosolic Fe-S biogenesis. Transfers electrons from NADPH to the Fe-S cluster of DRE2. Positively controls H(2)O(2)-induced cell death; In the C-terminal section; belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.
 
    
 0.440
A0A316ZFC1
Uncharacterized protein.
      
 0.422
A0A316Z8D8
Putative ATP-dependent RNA helicase DHH1; Belongs to the DEAD box helicase family.
   
  
 0.414
A0A316Z2S9
AD domain-containing protein.
      
 0.412
A0A316ZE17
Trimeric LpxA-like protein.
      
 0.412
Your Current Organism:
Tilletiopsis washingtonensis
NCBI taxonomy Id: 58919
Other names: ATCC 36489, CBS 544.50, JCM 8362, T. washingtonensis
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