STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A316ZC94Putative DNA mismatch repair protein MSH2; Component of the post-replicative DNA mismatch repair system (MMR). (977 aa)    
Predicted Functional Partners:
A0A316Z1Q4
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
  
0.999
A0A316Z9P9
DNA_MISMATCH_REPAIR_2 domain-containing protein.
  
0.999
A0A316Z9L5
DNA mismatch repair protein MutL.
 
 0.994
A0A316ZBA5
DNA mismatch repair protein MutL.
 
 0.992
A0A316ZCH5
PIN domain-like protein.
   
 0.982
A0A316YZ86
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.972
A0A316Z6F0
MutL_C domain-containing protein.
  
 0.950
FEN1
Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...]
   
 0.918
A0A316ZJC7
Gpi1-domain-containing protein.
 
      0.899
A0A316Z0T0
DNA polymerase.
   
 
 0.861
Your Current Organism:
Tilletiopsis washingtonensis
NCBI taxonomy Id: 58919
Other names: ATCC 36489, CBS 544.50, JCM 8362, T. washingtonensis
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