A0A316ZH91 protein (Tilletiopsis washingtonensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A316ZH91

Uncharacterized protein. (97 aa)

Predicted Functional Partners:

A0A316ZA80

0.977

A0A316Z7I8

0.941

A0A316Z9Y4

0.926

A0A316ZBZ5

0.926

A0A316Z511

0.908

A0A316Z725

0.885

A0A316ZFI0

0.844

A0A316ZBS8

0.833

A0A316ZL32

0.786

A0A316ZF19

0.772

Your Current Organism:

Tilletiopsis washingtonensis

NCBI taxonomy Id: 58919
Other names: ATCC 36489, CBS 544.50, JCM 8362, T. washingtonensis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A316Z511	A0A316Z725	Ubiquitin-domain-containing protein.	Putative polyubiquitin.	0.996
A0A316Z511	A0A316Z7I8	Ubiquitin-domain-containing protein.	Uncharacterized protein.	0.999
A0A316Z511	A0A316Z9Y4	Ubiquitin-domain-containing protein.	Putative ubiquitin conjugating enzyme E2-16 kDa; Belongs to the ubiquitin-conjugating enzyme family.	0.938
A0A316Z511	A0A316ZA80	Ubiquitin-domain-containing protein.	Putative ubiquitin-conjugating enzyme E2; Belongs to the ubiquitin-conjugating enzyme family.	0.993
A0A316Z511	A0A316ZBS8	Ubiquitin-domain-containing protein.	Ubiqutin ligase-like protein.	0.964
A0A316Z511	A0A316ZBZ5	Ubiquitin-domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.937
A0A316Z511	A0A316ZF19	Ubiquitin-domain-containing protein.	UBC-like protein; Belongs to the ubiquitin-conjugating enzyme family.	0.924
A0A316Z511	A0A316ZFI0	Ubiquitin-domain-containing protein.	Putative UBC5-E2 ubiquitin-conjugating enzyme.	0.916
A0A316Z511	A0A316ZH91	Ubiquitin-domain-containing protein.	Uncharacterized protein.	0.908
A0A316Z511	A0A316ZL32	Ubiquitin-domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.996
A0A316Z725	A0A316Z511	Putative polyubiquitin.	Ubiquitin-domain-containing protein.	0.996
A0A316Z725	A0A316Z7I8	Putative polyubiquitin.	Uncharacterized protein.	0.997
A0A316Z725	A0A316Z9Y4	Putative polyubiquitin.	Putative ubiquitin conjugating enzyme E2-16 kDa; Belongs to the ubiquitin-conjugating enzyme family.	0.960
A0A316Z725	A0A316ZA80	Putative polyubiquitin.	Putative ubiquitin-conjugating enzyme E2; Belongs to the ubiquitin-conjugating enzyme family.	0.996
A0A316Z725	A0A316ZBZ5	Putative polyubiquitin.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.952
A0A316Z725	A0A316ZF19	Putative polyubiquitin.	UBC-like protein; Belongs to the ubiquitin-conjugating enzyme family.	0.936
A0A316Z725	A0A316ZFI0	Putative polyubiquitin.	Putative UBC5-E2 ubiquitin-conjugating enzyme.	0.871
A0A316Z725	A0A316ZH91	Putative polyubiquitin.	Uncharacterized protein.	0.885
A0A316Z725	A0A316ZL32	Putative polyubiquitin.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.997
A0A316Z7I8	A0A316Z511	Uncharacterized protein.	Ubiquitin-domain-containing protein.	0.999