STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT26750.1Predicted kinase, aminoglycoside phosphotransferase (APT) family. (308 aa)    
Predicted Functional Partners:
SDS23267.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.553
SDT26699.1
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
       0.548
SDT26723.1
Protein tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
       0.548
SDT26780.1
Hypothetical protein.
       0.518
SDT26812.1
Hypothetical protein.
       0.518
SDS56691.1
DNA-binding transcriptional regulator, ArsR family.
  
     0.438
SDR80770.1
Protein N-acetyltransferase, RimJ/RimL family.
   
   0.413
SDT36169.1
Protein N-acetyltransferase, RimJ/RimL family.
   
   0.413
Your Current Organism:
Agromyces flavus
NCBI taxonomy Id: 589382
Other names: A. flavus, Agromyces flavus Chen et al. 2011, Agromyces sp. CPCC 202695, CCM 7623, CPCC 202695, KCTC 19578
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.