STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
palPeptidoglycan-associated lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. (194 aa)    
Predicted Functional Partners:
ADH85593.1
WD40 domain protein beta Propeller; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
 
 0.920
ADH85299.1
PFAM: WD40 domain protein beta Propeller; KEGG: gbm:Gbem_2492 peptidase S9B dipeptidylpeptidase IV domain protein.
  
 
 0.824
ADH85732.1
PFAM: outer membrane chaperone Skp (OmpH); KEGG: dsa:Desal_2523 outer membrane chaperone Skp (OmpH).
 
 
 0.805
bamA
Outer membrane protein assembly complex, YaeT protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
 
 
 0.792
ADH85590.1
Protein TolQ; KEGG: dps:DP2409 biopolymer transport protein TolQ; TIGRFAM: protein TolQ; PFAM: MotA/TolQ/ExbB proton channel.
 
   
 0.775
ADH85591.1
Protein TolR; KEGG: sfu:Sfum_0753 biopolymer transport protein ExbD/TolR; TIGRFAM: protein TolR; PFAM: Biopolymer transport protein ExbD/TolR.
 
 
 
 0.742
ADH86807.1
PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: tye:THEYE_A0094 outer membrane protein, putative.
  
 
 
 0.732
ADH86002.1
KEGG: dps:DP1628 lipoprotein releasing system transmembrane protein (LolC); TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214.
  
 
   0.701
ADH86382.1
KEGG: dps:DP1676 membrane-bound lytic murein transglycosylase D [precursor]; PFAM: Lytic transglycosylase catalytic; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM.
 
 
 
 0.646
cpoB
Tol-pal system protein YbgF; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family.
 
  
 0.581
Your Current Organism:
Desulfurivibrio alkaliphilus
NCBI taxonomy Id: 589865
Other names: D. alkaliphilus AHT 2, Desulfurivibrio alkaliphilus AHT 2, Desulfurivibrio alkaliphilus str. AHT 2, Desulfurivibrio alkaliphilus strain AHT 2
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