STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACZ75336.1PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: dze:Dd1591_3640 periplasmic binding protein/LacI transcriptional regulator. (311 aa)    
Predicted Functional Partners:
ACZ75339.1
PFAM: inner-membrane translocator; KEGG: dze:Dd1591_3637 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 0.988
ACZ75338.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dze:Dd1591_3638 ABC transporter related.
 
 0.984
ACZ75337.1
PFAM: periplasmic lipoprotein; KEGG: dze:Dd1591_3639 putative lipoprotein.
 
    0.894
rbsD
RbsD or FucU transport; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
 
  
 0.892
ACZ78968.1
PFAM: inner-membrane translocator; KEGG: dze:Dd1591_4173 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.861
ACZ75604.1
PFAM: inner-membrane translocator; KEGG: dze:Dd1591_3336 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.858
ACZ77203.1
PFAM: inner-membrane translocator; KEGG: dze:Dd1591_2416 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.857
ACZ76947.1
PFAM: inner-membrane translocator; KEGG: dze:Dd1591_2147 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.845
ACZ75208.1
KEGG: dze:Dd1591_3789 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; histidine kinase A domain protein; response regulator receiver; Hpt domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; response regulator receiver; Hpt domain protein.
   
 
 0.822
ACZ78163.1
PFAM: Protein of unknown function DUF2222; histidine kinase HAMP region domain protein; histidine kinase A domain protein; ATP-binding region ATPase domain protein; response regulator receiver; Hpt domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; response regulator receiver; Hpt domain protein; KEGG: dze:Dd1591_0813 Hpt sensor hybrid histidine kinase.
   
 
 0.815
Your Current Organism:
Dickeya zeae
NCBI taxonomy Id: 590409
Other names: D. zeae Ech586, Dickeya dadantii Ech586, Dickeya zeae Ech586
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.