STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACZ76157.1TIGRFAM: type VI secretion system Vgr family protein; Rhs element Vgr protein; PFAM: Rhs element Vgr protein; KEGG: dze:Dd1591_2825 type VI secretion system Vgr family protein. (678 aa)    
Predicted Functional Partners:
ACZ76158.1
KEGG: dze:Dd1591_2824 PaaR repeat-containing protein.
     0.940
ACZ76176.1
TIGRFAM: type VI secretion protein, VC_A0111 family; PFAM: protein of unknown function DUF1305; KEGG: dze:Dd1591_2803 type VI secretion protein, VC_A0111 family.
 
  
 0.924
ACZ76172.1
TIGRFAM: type VI secretion protein, VC_A0107 family; PFAM: conserved hypothetical protein; KEGG: dze:Dd1591_2807 type VI secretion protein, VC_A0107 family.
 
  
 0.910
ACZ76340.1
TIGRFAM: type VI secretion system Vgr family protein; Rhs element Vgr protein; PFAM: Rhs element Vgr protein; KEGG: dze:Dd1591_1502 type VI secretion system Vgr family protein.
  
  
 
0.901
ACZ76156.1
TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; KEGG: dze:Dd1591_2826 type VI secretion system effector, Hcp1 family.
 
  
 0.882
ACZ76173.1
TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family; PFAM: protein of unknown function DUF877; KEGG: dze:Dd1591_2806 type VI secretion protein, EvpB/VC_A0108 family.
 
  
 0.878
ACZ76180.1
TIGRFAM: type IV / VI secretion system protein, DotU family; PFAM: Type IV / VI secretion system, DotU; KEGG: dze:Dd1591_2799 type IV / VI secretion system protein, DotU family.
 
  
 0.868
ACZ76175.1
TIGRFAM: type VI secretion protein, VC_A0110 family; PFAM: protein of unknown function DUF879; KEGG: dze:Dd1591_2804 type VI secretion protein, VC_A0110 family.
 
  
 0.849
ACZ76174.1
TIGRFAM: type VI secretion system lysozyme-related protein; PFAM: GPW/gp25 family protein; KEGG: dze:Dd1591_2805 type VI secretion system lysozyme-related protein.
 
  
 0.847
ACZ76179.1
TIGRFAM: type VI secretion protein, VC_A0114 family; PFAM: protein of unknown function DUF876; KEGG: dze:Dd1591_2800 type VI secretion protein, VC_A0114 family.
 
  
 0.839
Your Current Organism:
Dickeya zeae
NCBI taxonomy Id: 590409
Other names: D. zeae Ech586, Dickeya dadantii Ech586, Dickeya zeae Ech586
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.