STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACZ76177.1TIGRFAM: type VI secretion system FHA domain protein; PFAM: Forkhead-associated protein; KEGG: dze:Dd1591_2802 FHA domain containing protein. (404 aa)    
Predicted Functional Partners:
ACZ76174.1
TIGRFAM: type VI secretion system lysozyme-related protein; PFAM: GPW/gp25 family protein; KEGG: dze:Dd1591_2805 type VI secretion system lysozyme-related protein.
 
  
 0.969
ACZ76178.1
TIGRFAM: type VI secretion lipoprotein, VC_A0113 family; KEGG: dze:Dd1591_2801 type VI secretion lipoprotein, VC_A0113 family.
 
  
 0.966
ACZ76179.1
TIGRFAM: type VI secretion protein, VC_A0114 family; PFAM: protein of unknown function DUF876; KEGG: dze:Dd1591_2800 type VI secretion protein, VC_A0114 family.
 
  
 0.966
ACZ76175.1
TIGRFAM: type VI secretion protein, VC_A0110 family; PFAM: protein of unknown function DUF879; KEGG: dze:Dd1591_2804 type VI secretion protein, VC_A0110 family.
 
  
 0.964
ACZ76180.1
TIGRFAM: type IV / VI secretion system protein, DotU family; PFAM: Type IV / VI secretion system, DotU; KEGG: dze:Dd1591_2799 type IV / VI secretion system protein, DotU family.
 
  
 0.964
ACZ76176.1
TIGRFAM: type VI secretion protein, VC_A0111 family; PFAM: protein of unknown function DUF1305; KEGG: dze:Dd1591_2803 type VI secretion protein, VC_A0111 family.
 
  
 0.962
ACZ76173.1
TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family; PFAM: protein of unknown function DUF877; KEGG: dze:Dd1591_2806 type VI secretion protein, EvpB/VC_A0108 family.
 
  
 0.959
ACZ76172.1
TIGRFAM: type VI secretion protein, VC_A0107 family; PFAM: conserved hypothetical protein; KEGG: dze:Dd1591_2807 type VI secretion protein, VC_A0107 family.
 
  
 0.956
ACZ76184.1
TIGRFAM: type VI secretion-associated protein, VC_A0119 family; PFAM: ImpA domain protein; KEGG: dze:Dd1591_2795 type VI secretion-associated protein, VC_A0119 family.
 
  
 0.944
ACZ76185.1
TIGRFAM: type VI secretion protein IcmF; PFAM: ImcF domain protein; protein of unknown function DUF1215; KEGG: dze:Dd1591_2794 type VI secretion protein IcmF.
 
  
 0.939
Your Current Organism:
Dickeya zeae
NCBI taxonomy Id: 590409
Other names: D. zeae Ech586, Dickeya dadantii Ech586, Dickeya zeae Ech586
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