STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACZ77570.1PFAM: nickel-dependent hydrogenase large subunit; KEGG: dze:Dd1591_1413 nickel-dependent hydrogenase large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family. (568 aa)    
Predicted Functional Partners:
ACZ77573.1
KEGG: dze:Dd1591_1410 hydrogenase (NiFe) small subunit HydA; TIGRFAM: hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit.
 
 0.999
hypA
Hydrogenase nickel insertion protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
 
 
 0.989
ACZ77569.1
TIGRFAM: hydrogenase expression/formation protein; hydrogenase maturation protease; PFAM: peptidase M52 hydrogen uptake protein; KEGG: dze:Dd1591_1414 hydrogenase expression/formation protein.
 
 
 0.981
ACZ77571.1
PFAM: Polysulphide reductase NrfD; KEGG: dze:Dd1591_1412 polysulphide reductase NrfD.
 
  
 0.971
ACZ77572.1
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dze:Dd1591_1411 4Fe-4S ferredoxin iron-sulfur binding domain protein.
 
  
 0.960
ACZ77568.1
KEGG: dze:Dd1591_1415 hydrogenase 2-specific chaperone.
 
  
 0.958
ACZ77564.1
TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: hydrogenase formation HypD protein; KEGG: dze:Dd1591_1419 hydrogenase expression/formation protein HypD; Belongs to the HypD family.
 
 
 0.952
ACZ75589.1
TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase; Pyruvate-flavodoxin oxidoreductase, EKR domain; 4Fe-4S ferredoxin iron-sulfur binding domain protein; thiamine pyrophosphate protein domain protein TPP-binding; KEGG: dze:Dd1591_3355 pyruvate ferredoxin/flavodoxin oxidoreductase.
  
  
 0.949
ACZ77566.1
TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein P47K; KEGG: dze:Dd1591_1417 hydrogenase accessory protein HypB.
 
   
 0.939
ACZ77563.1
TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein domain protein; AIR synthase related protein; KEGG: dze:Dd1591_1420 hydrogenase expression/formation protein HypE.
 
   
 0.934
Your Current Organism:
Dickeya zeae
NCBI taxonomy Id: 590409
Other names: D. zeae Ech586, Dickeya dadantii Ech586, Dickeya zeae Ech586
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