STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACZ78967.1PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: dze:Dd1591_4172 periplasmic binding protein/LacI transcriptional regulator. (296 aa)    
Predicted Functional Partners:
ACZ78968.1
PFAM: inner-membrane translocator; KEGG: dze:Dd1591_4173 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 0.997
rbsA
ABC transporter related protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
 0.994
rbsD
RbsD or FucU transport; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
 
  
 0.976
ACZ75392.1
PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; ligand binding Tar domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; ligand binding Tar domain protein; KEGG: dze:Dd1591_3580 methyl-accepting chemotaxis sensory transducer.
     
  0.900
ACZ76362.1
PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: dze:Dd1591_1535 methyl-accepting chemotaxis sensory transducer.
     
  0.900
ACZ78443.1
PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: dze:Dd1591_0523 methyl-accepting chemotaxis sensory transducer.
     
  0.900
ACZ75604.1
PFAM: inner-membrane translocator; KEGG: dze:Dd1591_3336 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.880
ACZ75339.1
PFAM: inner-membrane translocator; KEGG: dze:Dd1591_3637 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.878
ACZ76947.1
PFAM: inner-membrane translocator; KEGG: dze:Dd1591_2147 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.869
ACZ77203.1
PFAM: inner-membrane translocator; KEGG: dze:Dd1591_2416 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.859
Your Current Organism:
Dickeya zeae
NCBI taxonomy Id: 590409
Other names: D. zeae Ech586, Dickeya dadantii Ech586, Dickeya zeae Ech586
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