STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Celf_1690PFAM: ABC-2 type transporter; KEGG: ABC-type multidrug transport system, permease component. (273 aa)    
Predicted Functional Partners:
Celf_1691
KEGG: ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
    0.949
Celf_1689
PFAM: cytochrome oxidase assembly; KEGG: cytochrome oxidase assembly.
     0.910
Celf_1687
PFAM: ABC-2 type transporter; KEGG: ABC-type polysaccharide/polyol phosphate export systems, permease component.
 
  
  0.651
Celf_2188
Hypothetical protein; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family.
  
     0.617
Celf_3749
PFAM: ABC-2 type transporter; KEGG: cwo:Cwoe_0966 ABC-2 type transporter.
  
  
  0.596
Celf_2155
KEGG: hypothetical protein.
  
     0.591
Celf_1692
KEGG: putative transcriptional regulator.
       0.589
Celf_1693
KEGG: FeS assembly protein SufB; TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein.
       0.589
Celf_1694
KEGG: FeS assembly protein SufD; TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein.
       0.589
Celf_1695
PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: Rieske (2Fe-2S) iron-sulfur domain protein.
       0.589
Your Current Organism:
Cellulomonas fimi
NCBI taxonomy Id: 590998
Other names: C. fimi ATCC 484, Cellulomonas fimi ATCC 484, Cellulomonas fimi DSM 20113, Cellulomonas fimi str. ATCC 484, Cellulomonas fimi strain ATCC 484
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.