STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cbhAExoglucanase A; This enzyme hydrolyzes 1,4-beta-D-glucosidic linkages of cellulose. Weak activity against carboxymethylcellulose, bacterial microcrystalline cellulose and barley beta-glucan. Has also weak endoglucanase activity. Hydrolyzes glucosidic bonds with inversion of anomeric configuration (872 aa)    
Predicted Functional Partners:
Celf_1481
Endoglucanase; PFAM: glycoside hydrolase family 9; KEGG: glycoside hydrolase family 9
 
  
 0.987
Celf_1705
Endoglucanase; PFAM: glycoside hydrolase family 9; Carbohydrate-binding CenC domain protein; KEGG: glycoside hydrolase family 9
 
  
 0.986
Celf_0233
Glucanase; KEGG: gob:Gobs_0234 1,4-beta cellobiohydrolase; PFAM: 1, 4-beta cellobiohydrolase; Belongs to the glycosyl hydrolase family 6
  
  
 0.981
Celf_1924
KEGG: ami:Amir_3216 glycoside hydrolase family 5; PFAM: glycoside hydrolase family 5; Fibronectin type III domain protein; cellulose-binding family II; SMART: cellulose-binding family II; Fibronectin type III domain protein
 
0.975
cenC
Endoglucanase C; The biological conversion of cellulose to glucose generally requires three types of hydrolytic enzymes: (1) Endoglucanases which cut internal beta-1,4-glucosidic bonds; (2) Exocellobiohydrolases that cut the disaccharide cellobiose from the non-reducing end of the cellulose polymer chain; (3) Beta-1,4- glucosidases which hydrolyze the cellobiose and other short cello- oligosaccharides to glucose
  
 0.952
Celf_2783
TIGRFAM: beta-galactosidase; KEGG: beta-galactosidase; PFAM: glycoside hydrolase family 1; Belongs to the glycosyl hydrolase 1 family
  
 
 0.952
Celf_0045
Endoglucanase; KEGG: glycoside hydrolase family 9; PFAM: glycoside hydrolase family 9; Fibronectin type III domain protein; cellulose-binding family II; SMART: cellulose-binding family II; Fibronectin type III domain protein
  
  
0.942
Celf_0376
Cellulase; KEGG: xce:Xcel_0182 cellulase; PFAM: glycoside hydrolase family 5; protein of unknown function DUF291; Belongs to the glycosyl hydrolase 5 (cellulase A) family
 
 
 0.940
Celf_0019
Endoglucanase; KEGG: glycoside hydrolase family 9; PFAM: glycoside hydrolase family 9; cellulose-binding family II; Fibronectin type III domain protein; type 3a cellulose-binding domain protein; SMART: cellulose-binding family II; Fibronectin type III domain protein
  
  
0.936
Celf_2791
PFAM: glycoside hydrolase family 3 domain protein; KEGG: bcv:Bcav_1318 beta-glucosidase
  
 
 0.926
Your Current Organism:
Cellulomonas fimi
NCBI taxonomy Id: 590998
Other names: C. fimi ATCC 484, Cellulomonas fimi, Cellulomonas fimi ATCC 484, Cellulomonas fimi ATCC484, Cellulomonas fimi DSM 20113, Cellulomonas fimi str. ATCC 484, Cellulomonas fimi strain ATCC 484
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