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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADB48315.1PFAM: Dicarboxylate carrier MatC domain protein; KEGG: mmw:Mmwyl1_0970 dicarboxylate carrier MatC domain-containing protein. (437 aa)    
Predicted Functional Partners:
ADB48316.1
KEGG: cma:Cmaq_1396 hypothetical protein.
 
    0.896
ADB48317.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cac:CAC3361 LysR family transcriptional regulator.
       0.496
ADB46810.1
PFAM: Citrate transporter; KEGG: asu:Asuc_1303 citrate transporter.
  
     0.439
ADB46809.1
PFAM: Citrate transporter; KEGG: asu:Asuc_1303 citrate transporter.
  
     0.438
ADB46506.1
PFAM: Citrate transporter; KEGG: asu:Asuc_1303 citrate transporter.
  
     0.434
citG
KEGG: asu:Asuc_1198 holo-ACP synthase, triphosphoribosyl-dephospho-CoA synthase; TIGRFAM: holo-ACP synthase CitX; PFAM: triphosphoribosyl-dephospho-CoA protein; Apo- citrate lyase phosphoribosyl-dephospho-CoA transferase.
 
  
 0.434
ADB48350.1
KEGG: bcl:ABC0392 hypothetical protein.
  
     0.427
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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