STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE87879.1Putative metal-dependent hydrolase. (163 aa)    
Predicted Functional Partners:
rpsQ
30S ribosomal protein S17.
    
 0.918
truA
COG0101 Pseudouridylate synthase.
  
  0.897
EEV24839.1
COG0607 Rhodanese-related sulfurtransferase.
    
  0.894
EEV25324.1
COG0301 Thiamine biosynthesis ATP pyrophosphatase.
    
  0.894
glpE
Thiosulfate sulfurtransferase GlpE.
    
  0.894
EEV24865.1
PhoH-like protein; COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase.
  
  
 0.876
sodA
Manganese superoxide dismutase.
   
 
 0.862
rplU
COG0261 Ribosomal protein L21.
  
   0.847
rplX
50S ribosomal protein L24.
  
   0.837
rplQ
50S ribosomal protein L17.
   
   0.836
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.