STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lrpLeucine-responsive regulatory protein. (160 aa)    
Predicted Functional Partners:
ftsK
DNA translocase FtsK.
     
 0.794
EEV24658.1
COG1522 Transcriptional regulators.
  
     0.769
EEV24999.1
COG1648 Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain).
  
 
 0.731
birA
Bifunctional biotin operon repressor/biotin synthetase BirA.
   
 
 0.724
rnd
Ribonuclease D.
       0.625
EEV25130.1
Bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase; COG0134 Indole-3-glycerol phosphate synthase.
    
 0.502
AM202_0062
Hypothetical protein.
       0.491
AM202_0406
Hypothetical protein.
   
 
  0.490
leuD
Isopropylmalate isomerase small subunit.
    
  0.459
putA
Bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase.
     
 0.435
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.