STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xerCCOG4973 Site-specific recombinase XerC. (300 aa)    
Predicted Functional Partners:
xerD
Site-specific recombinase XerD.
 
 
0.862
EEV24815.1
Hypothetical protein.
       0.773
ruvB
COG2255 Holliday junction resolvasome, helicase subunit.
  
  
 0.757
ruvA
COG0632 Holliday junction resolvasome, DNA-binding subunit.
  
  
 0.744
ftsK
DNA translocase FtsK.
  
   
 0.737
bioD
COG0132 Dethiobiotin synthetase.
       0.709
EEV24817.1
Biotin synthesis protein; COG0500 SAM-dependent methyltransferases.
       0.709
EEV24818.1
Dithiobiotin synthetase; COG2830 Uncharacterized protein conserved in bacteria.
       0.709
EEV24351.1
COG0556 Helicase subunit of the DNA excision repair complex.
     
 0.702
EEV24819.1
8-amino-7-oxononanoate synthase; COG0156 7-keto-8-aminopelargonate synthetase and related enzymes.
       0.695
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.