STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rplUCOG0261 Ribosomal protein L21. (103 aa)    
Predicted Functional Partners:
rpmA
COG0211 Ribosomal protein L27.
 
 0.998
rplS
50S ribosomal protein L19.
 
 
 0.994
rpsP
30S ribosomal protein S16.
 
 
 0.991
rplT
COG0292 Ribosomal protein L20.
 
 
 0.990
rplV
50S ribosomal protein L22.
  
 
 0.990
rpsB
30S ribosomal protein S2.
  
 
 0.989
rpmB
COG0227 Ribosomal protein L28.
  
 
 0.989
rpmF
COG0333 Ribosomal protein L32.
  
 
 0.989
rplI
COG0359 Ribosomal protein L9.
 
 
 0.989
rplK
50S ribosomal protein L11.
  
 
 0.989
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.