STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lpxCCOG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase. (306 aa)    
Predicted Functional Partners:
EEV24678.1
(3R)-hydroxymyristoyl-ACP dehydratase; COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases.
   
 0.950
lpxD
COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase.
 
 
 0.925
EEV24677.1
COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase.
 
  
 0.924
lpxB
lipid-A-disaccharide synthase; COG0763 Lipid A disaccharide synthetase.
 
   
 0.837
ddl
COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes.
     
 0.836
lpxK
Tetraacyldisaccharide 4'-kinase.
 
   
 0.831
kdtA
3-deoxy-D-manno-octulosonic-acid transferase.
 
   
 0.825
kpsF
Arabinose-5-phosphate isomerase.
 
  
 0.820
kdsB
3-deoxy-manno-octulosonate cytidylyltransferase.
 
   
 0.803
EEV24912.1
COG0206 Cell division GTPase.
  
  
 0.802
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.