STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
recNDNA repair protein. (559 aa)    
Predicted Functional Partners:
recA
Recombinase A.
  
  
 0.739
EEV24559.1
COG1197 Transcription-repair coupling factor (superfamily II helicase).
 
   
 0.608
EEV24614.1
LexA repressor; COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases).
   
  
 0.549
AM202_0803
Hypothetical protein.
   
  
 0.549
xseA
COG1570 Exonuclease VII, large subunit.
 
   
 0.535
tpiA
Triosephosphate isomerase.
       0.499
uvrC
COG0322 Nuclease subunit of the excinuclease complex.
  
   
 0.490
pheT
phenylalanyl-tRNA synthetase beta chain.
 
   
 0.473
EEV24204.1
DNA repair protein RadA; COG1066 Predicted ATP-dependent serine protease.
  
   
 0.466
rsmB
Trk system potassium uptake protein TrkA.
 
   
 0.465
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.