STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEV24960.1COG0789 Predicted transcriptional regulators. (133 aa)    
Predicted Functional Partners:
EEV25040.1
COG2812 DNA polymerase III, gamma/tau subunits.
    
  0.822
dnaJ
Chaperone protein dnaJ.
  
 
 0.821
EEV24961.1
Hypothetical protein; COG1230 Co/Zn/Cd efflux system component.
 
   
 0.751
EEV25138.1
DNA polymerase III subunit delta; COG0470 ATPase involved in DNA replication.
    
  0.742
EEV25110.1
COG0281 Malic enzyme.
  
 
  0.683
rpoB
DNA-directed RNA polymerase subunit beta.
    
 
 0.660
EEV25194.1
Aerobic respiration control sensor protein; COG0642 Signal transduction histidine kinase.
   
 
 0.632
EEV24259.1
GlnA protein; COG0174 Glutamine synthetase.
  
 
 0.630
rpoA
DNA-directed RNA polymerase subunit alpha.
   
   0.607
rpoZ
COG1758 DNA-directed RNA polymerase, subunit K/omega.
    
   0.606
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.