STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fbpCFerric transporter ATP-binding subunit; COG3842 ABC-type spermidine/putrescine transport systems, ATPase components. (348 aa)    
Predicted Functional Partners:
potB
Spermidine/putrescine transport system permease protein PotB.
 
 0.958
potC
Spermidine/putrescine transport system permease protein PotC.
 
 
 0.955
EEV24982.1
COG1178 ABC-type Fe3+ transport system, permease component.
 
 
  0.919
EEV25328.1
COG0687 Spermidine/putrescine-binding periplasmic protein.
 
 
 0.904
potD2
Spermidine/putrescine-binding periplasmic protein 1 precursor.
 
 
 0.904
cydD
Transport ATP-binding protein CydD.
 
   
 
0.874
EEV25216.1
COG4170 ABC-type antimicrobial peptide transport system, ATPase component.
 
 
 
0.866
modB
COG4149 ABC-type molybdate transport system, permease component.
 
 
  0.853
AM202_0807
ABC transporter ATP-binding protein.
 
 
 
 
0.842
EEV24311.1
Cysteine/glutathione ABC transporter membrane/ATP-binding component; COG4987 ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components.
 
   
 
0.827
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.