STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEV25098.1COG0631 Serine/threonine protein phosphatase. (247 aa)    
Predicted Functional Partners:
rsmB
Trk system potassium uptake protein TrkA.
  
  
 0.906
EEV24903.1
COG0076 Glutamate decarboxylase and related PLP-dependent proteins.
   
  0.798
fabG
3-ketoacyl-(acyl-carrier-protein) reductase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
   
 0.795
EEV25099.1
COG0846 NAD-dependent protein deacetylases, SIR2 family.
   
   0.789
EEV25016.1
COG0105 Nucleoside diphosphate kinase.
    
  0.785
fmt
COG0223 Methionyl-tRNA formyltransferase.
  
   0.779
dnaJ
Chaperone protein dnaJ.
  
   0.778
parE
DNA topoisomerase IV subunit B.
   
 
  0.746
EEV24308.1
DNA gyrase subunit B; COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit.
   
 
  0.746
dnaK
Chaperone protein dnaK.
  
 0.742
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.