STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xerDSite-specific recombinase XerD. (301 aa)    
Predicted Functional Partners:
xerC
COG4973 Site-specific recombinase XerC.
 
 
0.862
ruvB
COG2255 Holliday junction resolvasome, helicase subunit.
 
 
 0.764
ruvA
COG0632 Holliday junction resolvasome, DNA-binding subunit.
  
  
 0.749
EEV24601.1
Phosphate acetyltransferase; COG0857 BioD-like N-terminal domain of phosphotransacetylase.
    
 0.747
ruvC
COG0817 Holliday junction resolvasome, endonuclease subunit.
     
 0.708
ftsK
DNA translocase FtsK.
  
   
 0.707
EEV24351.1
COG0556 Helicase subunit of the DNA excision repair complex.
     
 0.702
uvrA
COG0178 Excinuclease ATPase subunit.
    
 0.694
EEV24289.1
Putative fatty acid oxidation complex alpha subunit; COG1024 Enoyl-CoA hydratase/carnithine racemase.
   
 
 0.676
EEV24857.1
Competence protein F; COG1040 Predicted amidophosphoribosyltransferases.
   
    0.650
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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