STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbsDHigh affinity ribose transport protein RbsD. (139 aa)    
Predicted Functional Partners:
rbsC
Ribose ABC transporter permease protein.
 
 
 0.979
rbsK
Ribokinase.
 
 
 0.971
rbsB
D-ribose transporter subunit RbsB.
 
 
 0.970
rbsA
D-ribose transporter ATP binding protein.
  
 
 0.952
AM202_0409
Hypothetical protein.
 
 
 0.879
EEV24936.1
Aminoimidazole riboside kinase; COG0524 Sugar kinases, ribokinase family.
  
 
 0.849
ACH82224.1
ABC transporter ATP-binding protein.
  
 
 0.808
mglA
Galactoside transport ATP-binding protein MglA.
  
 
 0.808
AM202_0408
Putative periplasmic binding protein/LacI transcriptional regulator.
 
 
 0.781
rbsR
Ribose operon repressor.
  
 
 0.713
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.