STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mscLCOG1970 Large-conductance mechanosensitive channel. (130 aa)    
Predicted Functional Partners:
ribH
6,7-dimethyl-8-ribityllumazine synthase.
   
  
 0.753
metK
S-adenosylmethionine synthetase.
   
    0.669
EEV25390.1
Trk system potassium uptake protein TrkH; COG0168 Trk-type K+ transport systems, membrane components.
     
 0.619
EEV25389.1
COG4635 Flavodoxin.
       0.467
EEV25391.1
Cell developmental protein SirA.
       0.467
EEV24771.1
COG0225 Peptide methionine sulfoxide reductase.
     
 0.419
kefBC
Glutathione-regulated potassium-efflux system protein.
     
 0.418
EEV24599.1
DNA polymerase I; COG0258 5'-3' exonuclease (including N-terminal domain of PolI).
     
 0.417
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.