STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lolEOuter membrane-specific lipoprotein transporter subunit LolE. (416 aa)    
Predicted Functional Partners:
lolD
Lipoprotein-releasing system ATP-binding protein lolD.
 
 0.988
AM202_0040
Putative macrolide-specific ABC-type efflux carrier.
  
 0.983
lolC
Lipoprotein-releasing system transmembrane protein lolC.
 
  
 
0.888
lolA
Outer-membrane lipoprotein carrier protein precursor.
 
 
 
 0.858
EEV24681.1
Protective surface antigen D15 precursor; COG4775 Outer membrane protein/protective antigen OMA87.
 
   
 0.751
EEV24723.1
COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins.
  
 
   0.731
EEV25222.1
COG0811 Biopolymer transport proteins.
 
    0.674
ACI28438.1
ABC-type multidrug transport system ATPase component.
  
 
 0.584
rpsA
COG0539 Ribosomal protein S1.
  
     0.576
oxaA
Inner membrane protein OxaA.
  
    0.562
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.