STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
typAGTP-binding protein. (615 aa)    
Predicted Functional Partners:
engA
GTP-binding protein EngA; COG1160 Predicted GTPases.
 
  
 0.716
guaA
Bifunctional GMP synthase/glutamine amidotransferase protein.
  
  
 0.713
rplA
50S ribosomal protein L1.
   
    0.659
rlmL
Putative N6-adenine-specific DNA methylase.
  
   0.613
grxA
Glutaredoxin.
       0.572
tsf
Elongation factor Ts.
  
  
 0.560
rpsI
COG0103 Ribosomal protein S9.
   
    0.557
rpsJ
30S ribosomal protein S10.
  
    0.549
rplD
50S ribosomal protein L4.
   
    0.543
rpsB
30S ribosomal protein S2.
   
    0.527
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.