EEV24298.1 protein (Actinobacillus minor) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

EEV24298.1

BisC protein; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing. (195 aa)

Predicted Functional Partners:

EEV24299.1

0.995

EEV24301.1

0.992

EEV24300.1

0.991

napG

0.962

EEV24302.1

0.943

EEV25349.1

0.934

EEV24542.1

0.934

EEV24935.1

0.930

napB

0.925

EEV24641.1

0.918

Your Current Organism:

Actinobacillus minor

NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EEV24298.1	EEV24299.1	AM202_05050	AM202_05055	BisC protein; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing.	BisC protein; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing.	0.995
EEV24298.1	EEV24300.1	AM202_05050	AM202_05060	BisC protein; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing.	Formate dehydrogenase, beta subunit; COG0437 Fe-S-cluster-containing hydrogenase components 1.	0.991
EEV24298.1	EEV24301.1	AM202_05050	AM202_05065	BisC protein; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing.	COG2864 Cytochrome b subunit of formate dehydrogenase.	0.992
EEV24298.1	EEV24302.1	AM202_05050	AM202_05070	BisC protein; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing.	COG3058 Uncharacterized protein involved in formate dehydrogenase formation.	0.943
EEV24298.1	EEV24542.1	AM202_05050	AM202_06285	BisC protein; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing.	Nitrate reductase, Fe-S protein; COG0437 Fe-S-cluster-containing hydrogenase components 1.	0.934
EEV24298.1	EEV24641.1	AM202_05050	AM202_00405	BisC protein; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing.	Anaerobic dimethyl sulfoxide reductase chain B; COG0437 Fe-S-cluster-containing hydrogenase components 1.	0.918
EEV24298.1	EEV24935.1	AM202_05050	AM202_01885	BisC protein; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing.	Copper-containing nitrite reductase precursor; COG2132 Putative multicopper oxidases.	0.930
EEV24298.1	EEV25349.1	AM202_05050	AM202_03977	BisC protein; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing.	Dimethylsulfoxide reductase chain B; COG0437 Fe-S-cluster-containing hydrogenase components 1.	0.934
EEV24298.1	napB	AM202_05050	AM202_0223	BisC protein; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing.	Nitrate reductase cytochrome c-type subunit.	0.925
EEV24298.1	napG	AM202_05050	AM202_0221	BisC protein; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing.	Ferredoxin-type protein napG-like protein.	0.962
EEV24299.1	EEV24298.1	AM202_05055	AM202_05050	BisC protein; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing.	BisC protein; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing.	0.995
EEV24299.1	EEV24300.1	AM202_05055	AM202_05060	BisC protein; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing.	Formate dehydrogenase, beta subunit; COG0437 Fe-S-cluster-containing hydrogenase components 1.	0.995
EEV24299.1	EEV24301.1	AM202_05055	AM202_05065	BisC protein; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing.	COG2864 Cytochrome b subunit of formate dehydrogenase.	0.995
EEV24299.1	EEV24302.1	AM202_05055	AM202_05070	BisC protein; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing.	COG3058 Uncharacterized protein involved in formate dehydrogenase formation.	0.953
EEV24299.1	EEV24542.1	AM202_05055	AM202_06285	BisC protein; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing.	Nitrate reductase, Fe-S protein; COG0437 Fe-S-cluster-containing hydrogenase components 1.	0.926
EEV24299.1	EEV24641.1	AM202_05055	AM202_00405	BisC protein; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing.	Anaerobic dimethyl sulfoxide reductase chain B; COG0437 Fe-S-cluster-containing hydrogenase components 1.	0.906
EEV24299.1	EEV24935.1	AM202_05055	AM202_01885	BisC protein; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing.	Copper-containing nitrite reductase precursor; COG2132 Putative multicopper oxidases.	0.930
EEV24299.1	EEV25349.1	AM202_05055	AM202_03977	BisC protein; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing.	Dimethylsulfoxide reductase chain B; COG0437 Fe-S-cluster-containing hydrogenase components 1.	0.935
EEV24299.1	napB	AM202_05055	AM202_0223	BisC protein; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing.	Nitrate reductase cytochrome c-type subunit.	0.925
EEV24299.1	napG	AM202_05055	AM202_0221	BisC protein; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing.	Ferredoxin-type protein napG-like protein.	0.962