STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dcdCOG0717 Deoxycytidine deaminase. (194 aa)    
Predicted Functional Partners:
EEV24488.1
COG0572 Uridine kinase.
    
 0.902
thyA
Thymidylate synthase.
  
 
 0.704
dut
Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase).
    
 0.697
EEV25016.1
COG0105 Nucleoside diphosphate kinase.
  
 
 0.689
tmk
COG0125 Thymidylate kinase.
  
 
 0.683
EEV25346.1
COG0127 Xanthosine triphosphate pyrophosphatase.
    
  0.678
mazG
Pyrophosphatase.
     
 0.666
AM202_0352
Anaerobic ribonucleoside triphosphate reductase.
    
  0.629
EEV24538.1
COG0209 Ribonucleotide reductase, alpha subunit.
    
 0.618
pyrG
COG0504 CTP synthase (UTP-ammonia lyase).
  
 
 0.612
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.