STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dinPDNA polymerase IV. (357 aa)    
Predicted Functional Partners:
EEV24522.1
COG0592 DNA polymerase sliding clamp subunit (PCNA homolog).
   
 0.997
EEV24614.1
LexA repressor; COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases).
  
 0.907
AM202_0803
Hypothetical protein.
  
 0.907
EEV25138.1
DNA polymerase III subunit delta; COG0470 ATPase involved in DNA replication.
  
 
 0.899
dnaE
COG0587 DNA polymerase III, alpha subunit.
 
 
 0.894
EEV24558.1
Hypothetical protein; COG1396 Predicted transcriptional regulators.
  
 0.892
recA
Recombinase A.
  
 0.859
EEV24599.1
DNA polymerase I; COG0258 5'-3' exonuclease (including N-terminal domain of PolI).
  
 0.823
dnaQ
DNA polymerase III subunit epsilon.
  
 
 0.767
holA
COG1466 DNA polymerase III, delta subunit.
    
 0.759
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.