STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
waaQHeptosyltransferase. (345 aa)    
Predicted Functional Partners:
fabG
3-ketoacyl-(acyl-carrier-protein) reductase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
    
  0.867
EEV24194.1
COG0633 Ferredoxin.
   
  0.846
EEV24255.1
HCP oxidoreductase, NADH-dependent; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
   
  0.846
EEV25232.1
COG0859 ADP-heptose:LPS heptosyltransferase.
  
   
 0.765
EEV25311.1
COG0859 ADP-heptose:LPS heptosyltransferase.
 
 
0.739
EEV25202.1
Bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase; COG2870 ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase.
 
 
 0.687
lgtF
UDP-glucose--lipooligosaccharide glucosyltransferase.
 
  
 0.673
EEV24868.1
Hypothetical protein; COG0859 ADP-heptose:LPS heptosyltransferase.
  
     0.611
pbpG-2
Penicillin-binding protein 7 precursor.
       0.576
EEV24198.1
COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family.
    
   0.571
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.