STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sfla_3455TIGRFAM: glutamate decarboxylase; KEGG: sgr:SGR_4077 putative glutamate decarboxylase; PFAM: Pyridoxal-dependent decarboxylase; Belongs to the group II decarboxylase family. (474 aa)    
Predicted Functional Partners:
glsA
Anti-sigma-factor antagonist; TIGRFAM: Glutaminase, core; KEGG: sgr:SGR_6768 putative glutaminase; PFAM: Glutaminase, core; Sulfate transporter/antisigma-factor antagonist STAS; Belongs to the glutaminase family.
  
 
 0.941
Sfla_4802
KEGG: sgr:SGR_5483 putative glutamate synthase (NADPH) large subunit; PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase; glutamate synthase alpha subunit domain protein; glutamine amidotransferase class-II.
    
 0.940
panC
Pantoate/beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.
  
 
 0.934
Sfla_0961
PFAM: aminotransferase class-III; KEGG: sgr:SGR_1232 putative aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.927
Sfla_1661
KEGG: sgr:SGR_1829 4-aminobutyrate aminotransferase; TIGRFAM: 4-aminobutyrate aminotransferase; PFAM: aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.927
Sfla_3374
PFAM: aminotransferase class-III; KEGG: sgr:SGR_3382 hypothetical protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.927
Sfla_0971
TIGRFAM: gamma-glutamyltransferase; KEGG: sgr:SGR_1239 putative gamma-glutamyltranspeptidase; PFAM: gamma-glutamyltranspeptidase.
     
 0.918
Sfla_4591
PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: sgr:SGR_5264 putative glutamine synthetase.
  
 
 0.915
Sfla_4631
KEGG: sgr:SGR_5315 putative glutamine synthetase; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp.
  
 
 0.914
Sfla_0940
Gamma-glutamyltransferase; KEGG: sma:SAV_1938 gamma-glutamyltranspeptidase; PFAM: gamma-glutamyltranspeptidase.
     
 0.913
Your Current Organism:
Streptomyces pratensis
NCBI taxonomy Id: 591167
Other names: S. pratensis ATCC 33331, Streptomyces flavogriseus ATCC 33331, Streptomyces pratensis ATCC 33331
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