STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sfla_4416Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer. (388 aa)    
Predicted Functional Partners:
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
 0.973
Sfla_0382
KEGG: sco:SCO6457 beta-galactosidase; PFAM: glycoside hydrolase family 42 domain 5 loop region; glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel.
 
 
 0.933
Sfla_5905
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
  
 
0.907
Sfla_4424
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
  
 
0.905
Sfla_0076
KEGG: sma:SAV_1082 alpha-galactosidase; PFAM: glycoside hydrolase clan GH-D.
  
 
  0.904
Sfla_2214
PFAM: ROK family protein; KEGG: sgr:SGR_2471 putative polyphosphate glucokinase.
    
 0.904
Sfla_3348
PFAM: Aldose 1-epimerase; KEGG: sgr:SGR_3420 hypothetical protein.
     
  0.900
Sfla_4417
PFAM: inner-membrane translocator; KEGG: sco:SCO2406 sugar transport permease; Belongs to the binding-protein-dependent transport system permease family.
       0.729
Sfla_4418
ABC transporter related protein; KEGG: sco:SCO2405 sugar-transport ATP binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
       0.705
Sfla_0075
Beta-galactosidase; KEGG: mau:Micau_1715 beta-galactosidase; PFAM: Glycoside hydrolase family 42 domain protein; Beta-galactosidase trimerisation domain protein; Beta-galactosidase domain protein.
  
 
 0.678
Your Current Organism:
Streptomyces pratensis
NCBI taxonomy Id: 591167
Other names: S. pratensis ATCC 33331, Streptomyces flavogriseus ATCC 33331, Streptomyces pratensis ATCC 33331
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