STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
traFConjugative transfer signal peptidase TraF; Annotation was generated automatically without manual curation. (185 aa)    
Predicted Functional Partners:
EDP46706.1
TrbI; Annotation was generated automatically without manual curation.
 
   
 0.911
EDP45911.1
Conjugal transfer protein TrbG; Annotation was generated automatically without manual curation.
 
   
 0.808
trbJ
P-type conjugative transfer protein TrbJ; Annotation was generated automatically without manual curation.
 
     0.807
EDP46219.1
Conjugal transfer protein TrbC; Annotation was generated automatically without manual curation.
 
   
 0.787
EDP46915.1
Conjugal transfer protein TrbC; Annotation was generated automatically without manual curation.
 
   
 0.786
EDP46494.1
CagE, TrbE, VirB component of type IV transporter system; Annotation was generated automatically without manual curation.
 
   
 0.784
EDP45789.1
ATPase; Annotation was generated automatically without manual curation.
 
   
 0.784
EDP46672.1
Hypothetical protein; Annotation was generated automatically without manual curation; identified by glimmer; putative.
 
     0.780
EDP46933.1
Mating pair formation protein TrbI; Annotation was generated automatically without manual curation.
 
     0.780
EDP45855.1
Putative TrbF protein; Annotation was generated automatically without manual curation.
 
     0.780
Your Current Organism:
Rickettsiella grylli
NCBI taxonomy Id: 59196
Other names: R. grylli
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.