STRINGSTRING
GCWU000321_00047 protein (Dialister invisus) - STRING interaction network
"GCWU000321_00047" - Uncharacterized protein in Dialister invisus
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCWU000321_00047Uncharacterized protein (243 aa)    
Predicted Functional Partners:
GCWU000321_00046
Undecaprenyl pyrophosphate phosphatase (236 aa)
              0.644
GCWU000321_00877
Zeta toxin (347 aa)
 
     
  0.628
GCWU000321_01386
Uncharacterized protein (1279 aa)
   
          0.618
dnaG
DNA primase ; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication (597 aa)
              0.601
GCWU000321_00049
RNA polymerase sigma factor SigA ; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth (388 aa)
              0.591
GCWU000321_00600
Hydrid cluster protein-associated redox disulfide domain protein (331 aa)
   
          0.582
GCWU000321_01733
Transcriptional regulator, TetR family (218 aa)
   
          0.548
GCWU000321_01935
Uncharacterized protein (537 aa)
   
          0.542
GCWU000321_01560
Outer membrane protein alpha (617 aa)
   
          0.520
GCWU000321_00052
GTP cyclohydrolase 1 type 2 homolog (348 aa)
              0.442
Your Current Organism:
Dialister invisus
NCBI taxonomy Id: 592028
Other names: D. invisus, D. invisus DSM 15470, Dialister invisus, Dialister invisus DSM 15470, Dialister invisus Downes et al. 2003, Dialister invisus str. DSM 15470, Dialister invisus strain DSM 15470
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