STRINGSTRING
GCWU000321_00301 protein (Dialister invisus) - STRING interaction network
"GCWU000321_00301" - Prepilin-type cleavage/methylation N-terminal domain protein in Dialister invisus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCWU000321_00301Prepilin-type cleavage/methylation N-terminal domain protein (136 aa)    
Predicted Functional Partners:
GCWU000321_01592
Bacterial type II secretion system domain protein F (390 aa)
 
     
  0.664
GCWU000321_00302
Uncharacterized protein (74 aa)
              0.648
GCWU000321_01590
Type II/IV secretion system protein (389 aa)
 
     
  0.607
GCWU000321_00863
Bacterial type II and III secretion system protein (449 aa)
 
          0.526
GCWU000321_01591
Twitching motility protein (338 aa)
 
     
  0.524
GCWU000321_00303
Uncharacterized protein (111 aa)
              0.466
GCWU000321_00883
ComEA protein (185 aa)
         
  0.438
Your Current Organism:
Dialister invisus
NCBI taxonomy Id: 592028
Other names: D. invisus, D. invisus DSM 15470, Dialister invisus, Dialister invisus DSM 15470, Dialister invisus Downes et al. 2003, Dialister invisus str. DSM 15470, Dialister invisus strain DSM 15470
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