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gatB protein (Dialister invisus) - STRING interaction network
"gatB" - Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B in Dialister invisus
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
gatBAspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B ; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) (481 aa)    
Predicted Functional Partners:
gatA
Glutamyl-tRNA(Gln) amidotransferase subunit A ; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) (485 aa)
 
  0.999
gatC
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C ; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) (94 aa)
 
  0.999
gltX
Glutamyl-tRNA synthetase ; Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction- glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) (486 aa)
   
  0.996
GCWU000321_00068
tRNA ligase class I (E and Q), catalytic domain protein (312 aa)
   
  0.994
aspS
Aspartate--tRNA ligase (600 aa)
  0.991
glnS
Glutamine--tRNA ligase (562 aa)
 
  0.950
pth
Peptidyl-tRNA hydrolase ; The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis (190 aa)
   
 
    0.905
GCWU000321_00329
Uncharacterized protein (104 aa)
              0.859
GCWU000321_00334
DNA helicase (746 aa)
              0.779
ligA
Polydeoxyribonucleotide synthase [NAD(+)] ; DNA ligase that catalyzes the formation of phosphodiester linkages between 5’-phosphoryl and 3’-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA (669 aa)
              0.779
Your Current Organism:
Dialister invisus
NCBI taxonomy Id: 592028
Other names: D. invisus, D. invisus DSM 15470, Dialister invisus, Dialister invisus DSM 15470, Dialister invisus Downes et al. 2003, Dialister invisus str. DSM 15470, Dialister invisus strain DSM 15470
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