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GCWU000321_00381 protein (Dialister invisus) - STRING interaction network
"GCWU000321_00381" - Phosphoribulokinase/uridine kinase family protein in Dialister invisus
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCWU000321_00381Phosphoribulokinase/uridine kinase family protein (549 aa)    
Predicted Functional Partners:
upp
UPRTase ; Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate (207 aa)
   
  0.991
pheT
Phenylalanyl-tRNA synthetase beta subunit (823 aa)
   
 
  0.969
GCWU000321_00989
Lysyl-tRNA synthetase (631 aa)
   
   
  0.965
rplC
50S ribosomal protein L3 ; One of the primary rRNA binding proteins, it binds directly near the 3’-end of the 23S rRNA, where it nucleates assembly of the 50S subunit (213 aa)
     
  0.950
ispH
4-hydroxy-3-methylbut-2-enyl diphosphate reductase ; Converts 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP) (658 aa)
   
 
  0.950
metG
Methionine--tRNA ligase ; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation (676 aa)
   
   
  0.949
rplT
50S ribosomal protein L20 ; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit (116 aa)
   
  0.948
rplD
50S ribosomal protein L4 ; Forms part of the polypeptide exit tunnel (208 aa)
     
  0.932
rplB
50S ribosomal protein L2 ; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome (275 aa)
     
  0.930
rplQ
50S ribosomal protein L17 (113 aa)
     
  0.929
Your Current Organism:
Dialister invisus
NCBI taxonomy Id: 592028
Other names: D. invisus, D. invisus DSM 15470, Dialister invisus, Dialister invisus DSM 15470, Dialister invisus Downes et al. 2003, Dialister invisus str. DSM 15470, Dialister invisus strain DSM 15470
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