STRINGSTRING
GCWU000321_00390 protein (Dialister invisus) - STRING interaction network
"GCWU000321_00390" - Tat pathway signal sequence domain protein in Dialister invisus
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCWU000321_00390Tat pathway signal sequence domain protein (432 aa)    
Predicted Functional Partners:
GCWU000321_00389
Outer membrane protein (179 aa)
 
          0.961
GCWU000321_00391
Outer membrane protein, OMP85 family (655 aa)
 
          0.945
GCWU000321_00393
RNA polymerase sigma factor ; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (205 aa)
 
          0.912
lpxD
UDP-3-O-acylglucosamine N-acyltransferase ; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell (345 aa)
              0.868
GCWU000321_00388
Uncharacterized protein (321 aa)
              0.797
GCWU000321_00387
Outer membrane protein (151 aa)
              0.796
GCWU000321_01095
Outer membrane protein (138 aa)
 
          0.787
GCWU000321_01808
Outer membrane protein (134 aa)
 
          0.784
GCWU000321_00394
Uncharacterized protein (1461 aa)
 
          0.747
GCWU000321_00615
Uncharacterized protein (185 aa)
   
          0.719
Your Current Organism:
Dialister invisus
NCBI taxonomy Id: 592028
Other names: D. invisus, D. invisus DSM 15470, Dialister invisus, Dialister invisus DSM 15470, Dialister invisus Downes et al. 2003, Dialister invisus str. DSM 15470, Dialister invisus strain DSM 15470
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