STRINGSTRING
GCWU000321_00391 protein (Dialister invisus) - STRING interaction network
"GCWU000321_00391" - Outer membrane protein, OMP85 family in Dialister invisus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCWU000321_00391Outer membrane protein, OMP85 family (655 aa)    
Predicted Functional Partners:
GCWU000321_00389
Outer membrane protein (179 aa)
 
          0.961
GCWU000321_00390
Tat pathway signal sequence domain protein (432 aa)
 
          0.945
lpxD
UDP-3-O-acylglucosamine N-acyltransferase ; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell (345 aa)
 
   
  0.930
GCWU000321_00394
Uncharacterized protein (1461 aa)
 
          0.913
GCWU000321_00395
Outer membrane efflux protein (502 aa)
 
 
  0.880
GCWU000321_00650
Permease, YjgP/YjgQ family (361 aa)
 
   
  0.870
GCWU000321_01808
Outer membrane protein (134 aa)
 
          0.853
GCWU000321_00399
SpoIVB peptidase S55 (648 aa)
 
          0.842
GCWU000321_01095
Outer membrane protein (138 aa)
 
          0.796
rseP
Zinc metalloprotease (340 aa)
 
   
  0.791
Your Current Organism:
Dialister invisus
NCBI taxonomy Id: 592028
Other names: D. invisus, D. invisus DSM 15470, Dialister invisus, Dialister invisus DSM 15470, Dialister invisus Downes et al. 2003, Dialister invisus str. DSM 15470, Dialister invisus strain DSM 15470
Server load: low (7%) [HD]